Addressing Dynamics at Catalytic Heterogeneous Interfaces with DFT-MD : Anomalous Temperature Distributions from Commonly Used Thermostats
Korpelin, V., Kiljunen, T., Melander, M. M., Caro, M. A., Kristoffersen, H. H., Mammen, N., Apaja, V., & Honkala, K. (2022). Addressing Dynamics at Catalytic Heterogeneous Interfaces with DFT-MD : Anomalous Temperature Distributions from Commonly Used Thermostats. Journal of Physical Chemistry Letters, 13(11), 2644-2652. https://doi.org/10.1021/acs.jpclett.2c00230
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Journal of Physical Chemistry LettersAuthors
Date
2022Discipline
Fysikaalinen kemiaNanoscience CenterResurssiviisausyhteisöPhysical ChemistryNanoscience CenterSchool of Resource WisdomCopyright
© 2022 The Authors. Published by American Chemical Society
Density functional theory-based molecular dynamics (DFT-MD) has been widely used for studying the chemistry of heterogeneous interfacial systems under operational conditions. We report frequently overlooked errors in thermostated or constant-temperature DFT-MD simulations applied to study (electro)catalytic chemistry. Our results demonstrate that commonly used thermostats such as Nose−Hoover, Berendsen, and simple velocity rescaling methods fail to provide are liable temperature description for systems considered. Instead, nonconstant temperatures and large temperature gradients within the different parts of the system are observed. The errors are not a “feature” of any particular code but a represent in several ab initio molecular dynamics implementations. This uneven temperature distribution, due to inadequate thermostatting, is well-known in the classical MD community, where it is ascribed to the failure in kinetic energy equipartition among different degrees of freedom in heterogeneous systems (Harvey et al. J. Comput. Chem. 1998, 726−740) and termed the flying ice cube effect. We provide tantamount evidence that interfacial systems are susceptible to substantial flying ice cube effects and demonstrate that the traditional Nose−Hoover and Berendsen thermostats should be applied with care when simulating, for example, catalytic properties or structures of solvated interfaces and supported clusters. We conclude that the flying ice cube effect in these systems can be conveniently avoided using Langevin dynamics.
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American Chemical Society (ACS)ISSN Search the Publication Forum
1948-7185Publication in research information system
https://converis.jyu.fi/converis/portal/detail/Publication/104668333
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Related funder(s)
Research Council of Finland; Jane and Aatos Erkko FoundationFunding program(s)
Academy Project, AoF; Postdoctoral Researcher, AoF; Academy Research Fellow, AoF; FoundationAdditional information about funding
The project was funded by the Academy of Finland projects 307853 (M.M.M.), 338228 (M.M.M.), 310574 (M.A.C.), 330488 (M.A.C.), 317739 (M.M.M., N.M., and K.H.), and 332290 (N.M.). M.M.M. and K.H. also acknowledge Jane and Aatos Erkko Foundation for funding to the LACOR project.License
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