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dc.contributor.authorPihlajamäki, Antti
dc.contributor.authorHämäläinen, Joonas
dc.contributor.authorLinja, Joakim
dc.contributor.authorNieminen, Paavo
dc.contributor.authorMalola, Sami
dc.contributor.authorKärkkäinen, Tommi
dc.contributor.authorHäkkinen, Hannu
dc.date.accessioned2020-05-19T09:44:46Z
dc.date.available2020-05-19T09:44:46Z
dc.date.issued2020
dc.identifier.citationPihlajamäki, A., Hämäläinen, J., Linja, J., Nieminen, P., Malola, S., Kärkkäinen, T., & Häkkinen, H. (2020). Monte Carlo Simulations of Au38(SCH3)24 Nanocluster Using Distance-Based Machine Learning Methods. <i>Journal of Physical Chemistry A</i>, <i>124</i>(23), 4827-4836. <a href="https://doi.org/10.1021/acs.jpca.0c01512" target="_blank">https://doi.org/10.1021/acs.jpca.0c01512</a>
dc.identifier.otherCONVID_35668459
dc.identifier.urihttps://jyx.jyu.fi/handle/123456789/69062
dc.description.abstractWe present an implementation of distance-based machine learning (ML) methods to create a realistic atomistic interaction potential to be used in Monte Carlo simulations of thermal dynamics of thiolate (SR) protected gold nanoclusters. The ML potential is trained for Au38(SR)24 by using previously published, density functional theory (DFT) -based, molecular dynamics (MD) simulation data on two experimentally characterised structural isomers of the cluster, and validated against independent DFT MD simulations. This method opens a door to efficient probing of the configuration space for further investigations of thermal-dependent electronic and optical properties of Au38(SR)24. Our ML implementation strategy allows for generalisation and accuracy control of distance-based ML models for complex nanostructures having several chemical elements and interactions of varying strength.en
dc.format.mimetypeapplication/pdf
dc.languageeng
dc.language.isoeng
dc.publisherAmerican Chemical Society
dc.relation.ispartofseriesJournal of Physical Chemistry A
dc.rightsIn Copyright
dc.titleMonte Carlo Simulations of Au38(SCH3)24 Nanocluster Using Distance-Based Machine Learning Methods
dc.typearticle
dc.identifier.urnURN:NBN:fi:jyu-202005193315
dc.contributor.laitosFysiikan laitosfi
dc.contributor.laitosInformaatioteknologian tiedekuntafi
dc.contributor.laitosKemian laitosfi
dc.contributor.laitosDepartment of Physicsen
dc.contributor.laitosFaculty of Information Technologyen
dc.contributor.laitosDepartment of Chemistryen
dc.contributor.oppiaineNanoscience Centerfi
dc.contributor.oppiaineTietotekniikkafi
dc.contributor.oppiaineNanoscience Centeren
dc.contributor.oppiaineMathematical Information Technologyen
dc.type.urihttp://purl.org/eprint/type/JournalArticle
dc.type.coarhttp://purl.org/coar/resource_type/c_2df8fbb1
dc.description.reviewstatuspeerReviewed
dc.format.pagerange4827-4836
dc.relation.issn1089-5639
dc.relation.numberinseries23
dc.relation.volume124
dc.type.versionacceptedVersion
dc.rights.copyright© 2020 American Chemical Society
dc.rights.accesslevelopenAccessfi
dc.relation.grantnumber315549
dc.relation.grantnumber315550
dc.relation.grantnumber311877
dc.subject.ysonanohiukkaset
dc.subject.ysokoneoppiminen
dc.subject.ysoMonte Carlo -menetelmät
dc.subject.ysosimulointi
dc.format.contentfulltext
jyx.subject.urihttp://www.yso.fi/onto/yso/p23451
jyx.subject.urihttp://www.yso.fi/onto/yso/p21846
jyx.subject.urihttp://www.yso.fi/onto/yso/p6361
jyx.subject.urihttp://www.yso.fi/onto/yso/p4787
dc.rights.urlhttp://rightsstatements.org/page/InC/1.0/?language=en
dc.relation.doi10.1021/acs.jpca.0c01512
dc.relation.funderResearch Council of Finlanden
dc.relation.funderResearch Council of Finlanden
dc.relation.funderResearch Council of Finlanden
dc.relation.funderSuomen Akatemiafi
dc.relation.funderSuomen Akatemiafi
dc.relation.funderSuomen Akatemiafi
jyx.fundingprogramAcademy Programme, AoFen
jyx.fundingprogramAcademy Programme, AoFen
jyx.fundingprogramResearch profiles, AoFen
jyx.fundingprogramAkatemiaohjelma, SAfi
jyx.fundingprogramAkatemiaohjelma, SAfi
jyx.fundingprogramProfilointi, SAfi
jyx.fundinginformationThis work was supported by Academy of Finland through the AIPSE research program with grant 315549 to H.H. and 315550 to T.K., through the Universities Profiling Actions with grant 311877 to T.K., and through H.H.’s Academy Professorship. MC simulations were done at the FGCI node in the University of Jyväskylä (persistent identifier: urn:nbn:fi:researchinfras-2016072533) and the DFT MD simulations were run as part of a PRACE project 2018194723 at the Barcelona Supercomputing Centre.
dc.type.okmA1


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