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dc.contributor.authorPutkinen, Anuliina
dc.contributor.authorSiljanen, Henri M.P.
dc.contributor.authorLaihonen, Antti
dc.contributor.authorPaasisalo, Inga
dc.contributor.authorPorkka, Kaija
dc.contributor.authorTiirola, Marja
dc.contributor.authorHaikarainen, Iikka
dc.contributor.authorTenhovirta, Salla
dc.contributor.authorPihlatie, Mari
dc.date.accessioned2021-07-12T07:27:29Z
dc.date.available2021-07-12T07:27:29Z
dc.date.issued2021
dc.identifier.citationPutkinen, A., Siljanen, H. M., Laihonen, A., Paasisalo, I., Porkka, K., Tiirola, M., Haikarainen, I., Tenhovirta, S., & Pihlatie, M. (2021). New insight to the role of microbes in the methane exchange in trees : evidence from metagenomic sequencing. <i>New Phytologist</i>, <i>231</i>(2), 524-536. <a href="https://doi.org/10.1111/nph.17365" target="_blank">https://doi.org/10.1111/nph.17365</a>
dc.identifier.otherCONVID_52639750
dc.identifier.urihttps://jyx.jyu.fi/handle/123456789/77084
dc.description.abstractMethane (CH4) exchange in tree stems and canopies and the processes involved are among the least understood components of the global CH4 cycle. Recent studies have focused on quantifying tree stems as sources of CH4 and understanding abiotic CH4 emissions in plant canopies, with the role of microbial in situ CH4 formation receiving less attention. Moreover, despite initial reports revealing CH4 consumption, studies have not adequately evaluated the potential of microbial CH4 oxidation within trees. In this paper, we discuss the current level of understanding on these processes. Further, we demonstrate the potential of novel metagenomic tools in revealing the involvement of microbes in the CH4 exchange of plants, and particularly in boreal trees. We detected CH4 producing methanogens and novel monooxygenases, potentially involved in CH4 consumption, in coniferous plants. In addition, our field flux measurements from Norway spruce (Picea abies) canopies demonstrate both net CH4 emissions and uptake, giving further evidence that both production and consumption are relevant to the net CH4 exchange. Our findings, together with the emerging diversity of novel CH4 producing microbial groups, strongly suggest microbial analyses should be integrated in the studies aiming to reveal the processes and drivers behind plant CH4 exchange.en
dc.format.mimetypeapplication/pdf
dc.language.isoeng
dc.publisherWiley-Blackwell
dc.relation.ispartofseriesNew Phytologist
dc.rightsCC BY 4.0
dc.subject.otherboreal forests
dc.subject.othercaptured metagenomics
dc.subject.othermethane exchange
dc.subject.othermethanogenic archaea
dc.subject.othermethanotrophic bacteria
dc.subject.otherplant microbiome
dc.subject.othertree
dc.titleNew insight to the role of microbes in the methane exchange in trees : evidence from metagenomic sequencing
dc.typearticle
dc.identifier.urnURN:NBN:fi:jyu-202107124269
dc.contributor.laitosBio- ja ympäristötieteiden laitosfi
dc.contributor.laitosDepartment of Biological and Environmental Scienceen
dc.contributor.oppiaineYmpäristötiedefi
dc.contributor.oppiaineEnvironmental Scienceen
dc.type.urihttp://purl.org/eprint/type/JournalArticle
dc.type.coarhttp://purl.org/coar/resource_type/c_2df8fbb1
dc.description.reviewstatuspeerReviewed
dc.format.pagerange524-536
dc.relation.issn0028-646X
dc.relation.numberinseries2
dc.relation.volume231
dc.type.versionpublishedVersion
dc.rights.copyright© 2021 The Authors New Phytologist © 2021 New Phytologist Foundation
dc.rights.accesslevelopenAccessfi
dc.relation.grantnumber323063
dc.subject.ysobakteerit
dc.subject.ysoboreaalinen vyöhyke
dc.subject.ysoaineiden kierto
dc.subject.ysometsät
dc.subject.ysogenomiikka
dc.subject.ysopuut (kasvit)
dc.subject.ysometaani
dc.subject.ysokasvifysiologia
dc.subject.ysomikrobisto
dc.subject.ysoarkeonit
dc.format.contentfulltext
jyx.subject.urihttp://www.yso.fi/onto/yso/p1749
jyx.subject.urihttp://www.yso.fi/onto/yso/p16692
jyx.subject.urihttp://www.yso.fi/onto/yso/p12488
jyx.subject.urihttp://www.yso.fi/onto/yso/p5454
jyx.subject.urihttp://www.yso.fi/onto/yso/p5146
jyx.subject.urihttp://www.yso.fi/onto/yso/p8147
jyx.subject.urihttp://www.yso.fi/onto/yso/p13222
jyx.subject.urihttp://www.yso.fi/onto/yso/p10562
jyx.subject.urihttp://www.yso.fi/onto/yso/p27039
jyx.subject.urihttp://www.yso.fi/onto/yso/p15559
dc.rights.urlhttps://creativecommons.org/licenses/by/4.0/
dc.relation.doi10.1111/nph.17365
dc.relation.funderResearch Council of Finlanden
dc.relation.funderSuomen Akatemiafi
jyx.fundingprogramAcademy Project, AoFen
jyx.fundingprogramAkatemiahanke, SAfi
jyx.fundinginformationThis work was supported by The Academy of Finland (grants no. 290315, 288494, 319329, 323063), The Finnish Cultural Foundation, Helsinki Institute of Life Science (HiLIFE) fellow program (2017-2020), and the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program under grant agreement No 757695.
dc.type.okmA1


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