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dc.contributor.advisorSundberg , Lotta-Riina
dc.contributor.advisorLaanto , Elina
dc.contributor.advisorHelttunen, Kaisa
dc.contributor.authorShirvani, Hanieh
dc.date.accessioned2024-11-05T13:58:06Z
dc.date.available2024-11-05T13:58:06Z
dc.date.issued2024
dc.identifier.urihttps://jyx.jyu.fi/handle/123456789/98124
dc.description.abstractBacteriophages are viruses that infect bacteria and have the potential to serve as an alternative to antibiotic treatments for illnesses caused by multidrug-resistant bacteria. However, there remains a critical need to develop improved tools for monitoring their stability and bioactivity. Dynamic light scattering (DLS) may offer several advantages over plaque assay for determining phage stability, such as being quicker, more effective, and less damaging. This method measures the Brownian motion of phages in solution caused by bombardment from solvent molecules and links this motion to particle size. Our goal was to investigate whether DLS can be used in phage research and to examine the effect of different treatments on phages physical state. For this purpose, we examined two phages, T4 and PRD1, with their respective host strains of E. coli DMS616 and Salmonella enterica DS88. We used DLS to monitor the sizes of phage particles and investigate the changes triggered by sonication and heating. Both methods led to aggregation and an increase in the z-average. Furthermore, the sonication method caused the denaturation of phages and the formation of multiple sharp peaks. Our studies showed that DLS can be used to investigate the physical state of phages. By examining the correlation coefficient versus time plot, it was observed that the purified samples of intact phage particles had an intercept close to 1. Samples with intercepts significantly higher or lower than 1 indicated an underlying issue with the data, such as aggregation. Multiple shoulders indicated a heterogeneous sample. The intensity-weighted distribution provided the most accurate particle size measurements for monodisperse samples. However, for polydisperse samples, the volume distribution offered a better representation of the contribution of different particle sizes to the overall sample volume.en
dc.format.extent61
dc.language.isoen
dc.subject.otherdynamic light scattering
dc.subject.otherDLS
dc.subject.otherantobiotic
dc.subject.otherphage
dc.subject.otherT4
dc.subject.otherPRD1
dc.titleStudying the Physical State of Phages Using Dynamic Light Scattering (DLS)
dc.identifier.urnURN:NBN:fi:jyu-202411056973
dc.type.ontasotMaster’s thesisen
dc.type.ontasotPro gradu -tutkielmafi
dc.contributor.tiedekuntaMatemaattis-luonnontieteellinen tiedekuntafi
dc.contributor.tiedekuntaFaculty of Sciencesen
dc.contributor.laitosBio- ja ympäristötieteiden laitosfi
dc.contributor.laitosDepartment of Biological and Environmental Scienceen
dc.contributor.yliopistoJyväskylän yliopistofi
dc.contributor.yliopistoUniversity of Jyväskyläen
dc.contributor.oppiaineSolu- ja molekyylibiologiafi
dc.contributor.oppiaineCell and molecular biologyen
dc.rights.copyrightJulkaisu on tekijänoikeussäännösten alainen. Teosta voi lukea ja tulostaa henkilökohtaista käyttöä varten. Käyttö kaupallisiin tarkoituksiin on kielletty.fi
dc.rights.copyrightThis publication is copyrighted. You may download, display and print it for Your own personal use. Commercial use is prohibited.en
dc.contributor.oppiainekoodi4013
dc.subject.ysobakteriofagit
dc.subject.ysobakteerit
dc.subject.ysofagiterapia
dc.subject.ysovirukset
dc.subject.ysosironta
dc.subject.ysomolekyylidynamiikka
dc.subject.ysoinfektiot
dc.subject.ysomikrobiologia
dc.subject.ysoresistenssi
dc.subject.ysoisäntäsolut
dc.subject.ysobacteriophages
dc.subject.ysobacteria
dc.subject.ysophage therapy
dc.subject.ysoviruses
dc.subject.ysoscattering (physics)
dc.subject.ysomolecular dynamics
dc.subject.ysoinfections
dc.subject.ysomicrobiology
dc.subject.ysoresistance (medicine)
dc.subject.ysohost cells


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