dc.contributor.author | Lindholm, Vivian | |
dc.contributor.author | Raita-Hakola, Anna-Maria | |
dc.contributor.author | Annala, Leevi | |
dc.contributor.author | Salmivuori, Mari | |
dc.contributor.author | Jeskanen, Leila | |
dc.contributor.author | Saari, Heikki | |
dc.contributor.author | Koskenmies, Sari | |
dc.contributor.author | Pitkänen, Sari | |
dc.contributor.author | Pölönen, Ilkka | |
dc.contributor.author | Isoherranen, Kirsi | |
dc.contributor.author | Ranki, Annamari | |
dc.date.accessioned | 2022-06-22T11:02:23Z | |
dc.date.available | 2022-06-22T11:02:23Z | |
dc.date.issued | 2022 | |
dc.identifier.citation | Lindholm, V., Raita-Hakola, A.-M., Annala, L., Salmivuori, M., Jeskanen, L., Saari, H., Koskenmies, S., Pitkänen, S., Pölönen, I., Isoherranen, K., & Ranki, A. (2022). Differentiating Malignant from Benign Pigmented or Non-Pigmented Skin Tumours : A Pilot Study on 3D Hyperspectral Imaging of Complex Skin Surfaces and Convolutional Neural Networks. <i>Journal of Clinical Medicine</i>, <i>11</i>(7), Article 1914. <a href="https://doi.org/10.3390/jcm11071914" target="_blank">https://doi.org/10.3390/jcm11071914</a> | |
dc.identifier.other | CONVID_146493861 | |
dc.identifier.uri | https://jyx.jyu.fi/handle/123456789/81969 | |
dc.description.abstract | Several optical imaging techniques have been developed to ease the burden of skin cancer disease on our health care system. Hyperspectral images can be used to identify biological tissues by their diffuse reflected spectra. In this second part of a three-phase pilot study, we used a novel hand-held SICSURFIS Spectral Imager with an adaptable field of view and target-wise selectable wavelength channels to provide detailed spectral and spatial data for lesions on complex surfaces. The hyperspectral images (33 wavelengths, 477–891 nm) provided photometric data through individually controlled illumination modules, enabling convolutional networks to utilise spectral, spatial, and skin-surface models for the analyses. In total, 42 lesions were studied: 7 melanomas, 13 pigmented and 7 intradermal nevi, 10 basal cell carcinomas, and 5 squamous cell carcinomas. All lesions were excised for histological analyses. A pixel-wise analysis provided map-like images and classified pigmented lesions with a sensitivity of 87% and a specificity of 93%, and 79% and 91%, respectively, for non-pigmented lesions. A majority voting analysis, which provided the most probable lesion diagnosis, diagnosed 41 of 42 lesions correctly. This pilot study indicates that our non-invasive hyperspectral imaging system, which involves shape and depth data analysed by convolutional neural networks, is feasible for differentiating between malignant and benign pigmented and non-pigmented skin tumours, even on complex skin surfaces. | en |
dc.format.mimetype | application/pdf | |
dc.language.iso | eng | |
dc.publisher | MDPI AG | |
dc.relation.ispartofseries | Journal of Clinical Medicine | |
dc.rights | CC BY 4.0 | |
dc.subject.other | biomedical optical imaging | |
dc.subject.other | convolutional neural networks | |
dc.subject.other | hyperspectral imaging | |
dc.subject.other | non-invasive imaging | |
dc.subject.other | optical modelling | |
dc.subject.other | photometric stereo | |
dc.subject.other | skin cancer | |
dc.subject.other | skin imaging | |
dc.title | Differentiating Malignant from Benign Pigmented or Non-Pigmented Skin Tumours : A Pilot Study on 3D Hyperspectral Imaging of Complex Skin Surfaces and Convolutional Neural Networks | |
dc.type | research article | |
dc.identifier.urn | URN:NBN:fi:jyu-202206223574 | |
dc.contributor.laitos | Informaatioteknologian tiedekunta | fi |
dc.contributor.laitos | Faculty of Information Technology | en |
dc.contributor.oppiaine | Computing, Information Technology and Mathematics | fi |
dc.contributor.oppiaine | Tietotekniikka | fi |
dc.contributor.oppiaine | Laskennallinen tiede | fi |
dc.contributor.oppiaine | Computing, Information Technology and Mathematics | en |
dc.contributor.oppiaine | Mathematical Information Technology | en |
dc.contributor.oppiaine | Computational Science | en |
dc.type.uri | http://purl.org/eprint/type/JournalArticle | |
dc.type.coar | http://purl.org/coar/resource_type/c_2df8fbb1 | |
dc.description.reviewstatus | peerReviewed | |
dc.relation.issn | 2077-0383 | |
dc.relation.numberinseries | 7 | |
dc.relation.volume | 11 | |
dc.type.version | publishedVersion | |
dc.rights.copyright | © 2022 by the authors.
Licensee MDPI, Basel, Switzerland. | |
dc.rights.accesslevel | openAccess | fi |
dc.type.publication | article | |
dc.relation.grantnumber | 314519 | |
dc.subject.yso | ihosyöpä | |
dc.subject.yso | koneoppiminen | |
dc.subject.yso | melanooma | |
dc.subject.yso | neuroverkot | |
dc.subject.yso | hyperspektrikuvantaminen | |
dc.subject.yso | karsinoomat | |
dc.subject.yso | diagnostiikka | |
dc.format.content | fulltext | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p13613 | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p21846 | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p15128 | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p7292 | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p39290 | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p28373 | |
jyx.subject.uri | http://www.yso.fi/onto/yso/p416 | |
dc.rights.url | https://creativecommons.org/licenses/by/4.0/ | |
dc.relation.doi | 10.3390/jcm11071914 | |
dc.relation.funder | Research Council of Finland | en |
dc.relation.funder | Suomen Akatemia | fi |
jyx.fundingprogram | Academy Programme, AoF | en |
jyx.fundingprogram | Akatemiaohjelma, SA | fi |
jyx.fundinginformation | This research was funded by the RADDESS program of the Academy of Finland, consortium grant number 314519. Open access funding was provided by University of Helsinki. | |
dc.type.okm | A1 | |