Näytä suppeat kuvailutiedot

dc.contributor.authorOvaskainen, Otso
dc.contributor.authorAbrego, Nerea
dc.contributor.authorFurneaux, Brendan
dc.contributor.authorHardwick, Bess
dc.contributor.authorSomervuo, Panu
dc.contributor.authorPalorinne, Isabella
dc.contributor.authorAndrew, Nigel R.
dc.contributor.authorBabiy, Ulyana V.
dc.contributor.authorBao, Tan
dc.contributor.authorBazzano, Gisela
dc.contributor.authorBondarchuk, Svetlana N.
dc.contributor.authorBonebrake, Timothy C.
dc.contributor.authorBrennan, Georgina L.
dc.contributor.authorBret-Harte, Syndonia
dc.contributor.authorBässler, Claus
dc.contributor.authorCagnolo, Luciano
dc.contributor.authorCameron, Erin K.
dc.contributor.authorChapurlat, Elodie
dc.contributor.authorCreer, Simon
dc.contributor.authorD’Acqui, Luigi P.
dc.contributor.authorde Vere, Natasha
dc.contributor.authorDesprez-Loustau, Marie-Laure
dc.contributor.authorDongmo, Michel A. K.
dc.contributor.authorDyrholm Jacobsen, Ida B.
dc.contributor.authorFisher, Brian L.
dc.contributor.authorFlores de Jesus, Miguel
dc.contributor.authorGilbert, Gregory S.
dc.contributor.authorGriffith, Gareth W.
dc.contributor.authorGritsuk, Anna A.
dc.contributor.authorGross, Andrin
dc.contributor.authorGrudd, Håkan
dc.contributor.authorHalme, Panu
dc.contributor.authorHanna, Rachid
dc.contributor.authorHansen, Jannik
dc.contributor.authorHansen, Lars Holst
dc.contributor.authorHegbe, Apollon D. M. T.
dc.contributor.authorHill, Sarah
dc.contributor.authorHogg, Ian D.
dc.contributor.authorHultman, Jenni
dc.contributor.authorHyde, Kevin D.
dc.contributor.authorHynson, Nicole A.
dc.contributor.authorIvanova, Natalia
dc.contributor.authorKaristo, Petteri
dc.contributor.authorKerdraon, Deirdre
dc.contributor.authorKnorre, Anastasia
dc.contributor.authorKrisai-Greilhuber, Irmgard
dc.contributor.authorKurhinen, Juri
dc.contributor.authorKuzmina, Masha
dc.contributor.authorLecomte, Nicolas
dc.contributor.authorLecomte, Erin
dc.contributor.authorLoaiza, Viviana
dc.contributor.authorLundin, Erik
dc.contributor.authorMeire, Alexander
dc.contributor.authorMešić, Armin
dc.contributor.authorMiettinen, Otto
dc.contributor.authorMonkhause, Norman
dc.contributor.authorMortimer, Peter
dc.contributor.authorMüller, Jörg
dc.contributor.authorNilsson, R. Henrik
dc.contributor.authorNonti Puani, Yannick C.
dc.contributor.authorNordén, Jenni
dc.contributor.authorNordén, Björn
dc.contributor.authorPaz, Claudia
dc.contributor.authorPellikka, Petri
dc.contributor.authorPereira, Danilo
dc.contributor.authorPetch, Geoff
dc.contributor.authorPitkänen, Juha-Matti
dc.contributor.authorPopa, Flavius
dc.contributor.authorPotter, Caitlin
dc.contributor.authorPurhonen, Jenna
dc.contributor.authorPätsi, Sanna
dc.contributor.authorRafiq, Abdullah
dc.contributor.authorRaharinjanahary, Dimby
dc.contributor.authorRakos, Niklas
dc.contributor.authorRathnayaka, Achala R.
dc.contributor.authorRaundrup, Katrine
dc.contributor.authorRebriev, Yury A.
dc.contributor.authorRikkinen, Jouko
dc.contributor.authorRogers, Hanna M. K.
dc.contributor.authorRogovsky, Andrey
dc.contributor.authorRozhkov, Yuri
dc.contributor.authorRunnel, Kadri
dc.contributor.authorSaarto, Annika
dc.contributor.authorSavchenko, Anton
dc.contributor.authorSchlegel, Markus
dc.contributor.authorSchmidt, Niels Martin
dc.contributor.authorSeibold, Sebastian
dc.contributor.authorSkjøth, Carsten
dc.contributor.authorStengel, Elisa
dc.contributor.authorSutyrina, Svetlana V.
dc.contributor.authorSyvänperä, Ilkka
dc.contributor.authorTedersoo, Leho
dc.contributor.authorTimm, Jebidiah
dc.contributor.authorTipton, Laura
dc.contributor.authorToju, Hirokazu
dc.contributor.authorUscka-Perzanowska, Maria
dc.contributor.authorvan der Bank, Michelle
dc.contributor.authorvan der Bank, Herman F.
dc.contributor.authorVandenbrink, Bryan
dc.contributor.authorVentura, Stefano
dc.contributor.authorVignisson, Solvi R.
dc.contributor.authorWang, Xiaoyang
dc.contributor.authorWeisser, Wolfgang W.
dc.contributor.authorWijesinghe, Subodini N.
dc.contributor.authorJoseph, Wright S.
dc.contributor.authorYang, Chunyan
dc.contributor.authorYorou, Nourou S.
dc.contributor.authorYoung, Amanda
dc.contributor.authorYu, Douglas W.
dc.contributor.authorZakharov, Evgeny V.
dc.contributor.authorHebert, Paul D. N.
dc.contributor.authorRoslin, Tomas
dc.date.accessioned2024-06-12T07:53:44Z
dc.date.available2024-06-12T07:53:44Z
dc.date.issued2024
dc.identifier.citationOvaskainen, O., Abrego, N., Furneaux, B., Hardwick, B., Somervuo, P., Palorinne, I., Andrew, N. R., Babiy, U. V., Bao, T., Bazzano, G., Bondarchuk, S. N., Bonebrake, T. C., Brennan, G. L., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E. K., Chapurlat, E., Creer, S., . . . Roslin, T. (2024). Global Spore Sampling Project : A global, standardized dataset of airborne fungal DNA. <i>Scientific Data</i>, <i>11</i>, Article 561. <a href="https://doi.org/10.1038/s41597-024-03410-0" target="_blank">https://doi.org/10.1038/s41597-024-03410-0</a>
dc.identifier.otherCONVID_220420381
dc.identifier.urihttps://jyx.jyu.fi/handle/123456789/95779
dc.description.abstractNovel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.en
dc.format.mimetypeapplication/pdf
dc.language.isoeng
dc.publisherNature Publishing Group
dc.relation.ispartofseriesScientific Data
dc.rightsCC BY 4.0
dc.subject.otherbiodiversity
dc.subject.othercommunity ecology
dc.titleGlobal Spore Sampling Project : A global, standardized dataset of airborne fungal DNA
dc.typearticle
dc.identifier.urnURN:NBN:fi:jyu-202406124546
dc.contributor.laitosBio- ja ympäristötieteiden laitosfi
dc.contributor.laitosDepartment of Biological and Environmental Scienceen
dc.type.urihttp://purl.org/eprint/type/JournalArticle
dc.type.coarhttp://purl.org/coar/resource_type/c_2df8fbb1
dc.description.reviewstatuspeerReviewed
dc.relation.issn2052-4463
dc.relation.volume11
dc.type.versionpublishedVersion
dc.rights.copyright© 2024 the Authors
dc.rights.accesslevelopenAccessfi
dc.relation.grantnumber336212
dc.relation.grantnumber345110
dc.relation.grantnumber856506
dc.relation.grantnumber856506
dc.relation.projectidinfo:eu-repo/grantAgreement/EC/H2020/856506/EU//LIFEPLAN
dc.subject.ysoeliöyhteisöt
dc.subject.ysonäytteet
dc.subject.ysoitiöt
dc.subject.ysosienet
dc.subject.ysobiodiversiteetti
dc.subject.ysobioinformatiikka
dc.subject.ysotutkimusaineisto
dc.format.contentfulltext
jyx.subject.urihttp://www.yso.fi/onto/yso/p4636
jyx.subject.urihttp://www.yso.fi/onto/yso/p17934
jyx.subject.urihttp://www.yso.fi/onto/yso/p11308
jyx.subject.urihttp://www.yso.fi/onto/yso/p90
jyx.subject.urihttp://www.yso.fi/onto/yso/p5496
jyx.subject.urihttp://www.yso.fi/onto/yso/p15748
jyx.subject.urihttp://www.yso.fi/onto/yso/p16752
dc.rights.urlhttps://creativecommons.org/licenses/by/4.0/
dc.relation.doi10.1038/s41597-024-03410-0
dc.relation.funderResearch Council of Finlanden
dc.relation.funderResearch Council of Finlanden
dc.relation.funderEuropean Commissionen
dc.relation.funderSuomen Akatemiafi
dc.relation.funderSuomen Akatemiafi
dc.relation.funderEuroopan komissiofi
jyx.fundingprogramResearch post as Academy Professor, AoFen
jyx.fundingprogramResearch costs of Academy Professor, AoFen
jyx.fundingprogramERC European Research Council, H2020en
jyx.fundingprogramAkatemiaprofessorin tehtävä, SAfi
jyx.fundingprogramAkatemiaprofessorin tutkimuskulut, SAfi
jyx.fundingprogramERC European Research Council, H2020fi
jyx.fundinginformationThis study was supported by funding from Academy of Finland (grant no. 336212, 345110, 322266, 335354), the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No 856506; ERC-synergy project LIFEPLAN), EU Horizon 2020 project INTERACT, under grant agreements no. 730938 and 871120, Jane and Aatos Erkko Foundation, Research Council of Norway through its Centres of Excellence Funding Scheme (223257), Estonian Research Council (grant no. PRG1170, PRG632), FORMAS (grant no. 215-2011-498, 226-2014-1109), Polar Knowledge Canada, Natural Sciences and Engineering Research Council of Canada (NSERC Discovery grant to NL), Bruce McDonald, Natural Environment Research Council (NERC) U.K. (grant no. NE/N001710/1, NE/N002431/1), BBSRC (grant no. BB/L012286/1), Novo Nordisk Foundation (Project ID NNF22OC0071701), Austrian ministry of Science (the ABOL-HRSM project), municipality of Vienna (division Environmental protection), the Southern Scientific Centre RAS (project no. 122020100332-8), the Croatian Science Foundation under the project FunMed (grant no. HRZZ-IP-2022-10-5219), the US National Science Foundation (grant no. DEB-1655896, DEB-1655076, DEB-1932467), the Pepper-Giberson Chair Fund, the National Science Foundation of China (grant no. 41761144055, 41771063), Dirigibile Italia Station, Institute of Polar Science (ISP) - National Research Council (CNR), São Paulo Research Foundation (FAPESP 2016/25197-0) and Legado das Águas-Brazil, Hong Kong’s Research Grants Council (General Research Fund 17118317), the Norwegian Institute for Nature Research (NINA), the Canada Research Chair program, the International Institute of Tropical Agriculture, the Mushroom Research Foundation (MRF), Thailand, the Swedish Research Council’s support (grant no. 4.3-2021-00164) to SITES and Abisko Scientific Research Station, the Danish Environmental Protection Agency, and the Italian National Biodiversity Future Center (MUR-PNRR, Mission 4.2. Investment 1.4, Project CN00000033).
dc.type.okmA1


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