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dc.contributor.authorChen, Liang
dc.contributor.authorHeikkinen, Liisa
dc.contributor.authorWang, ChangLiang
dc.contributor.authorYang, Yang
dc.contributor.authorKnott, Emily
dc.contributor.authorWong, Garry
dc.date.accessioned2018-06-13T09:53:50Z
dc.date.available2018-06-13T09:53:50Z
dc.date.issued2018
dc.identifier.citationChen, L., Heikkinen, L., Wang, C., Yang, Y., Knott, E., & Wong, G. (2018). miRToolsGallery : a tag-based and rankable microRNA bioinformatics resources database portal. <i>Database : The journal of Biological Databases and Curation</i>, <i>2018</i>, Article bay004. <a href="https://doi.org/10.1093/database/bay004" target="_blank">https://doi.org/10.1093/database/bay004</a>
dc.identifier.otherCONVID_27923932
dc.identifier.otherTUTKAID_76929
dc.identifier.urihttps://jyx.jyu.fi/handle/123456789/58526
dc.description.abstractHundreds of bioinformatics tools have been developed for MicroRNA (miRNA) investigations including those used for identification, target prediction, structure and expression profile analysis. However, finding the correct tool for a specific application requires the tedious and laborious process of locating, downloading, testing and validating the appropriate tool from a group of nearly a thousand. In order to facilitate this process, we developed a novel database portal named miRToolsGallery. We constructed the portal by manually curating > 950 miRNA analysis tools and resources. In the portal, a query to locate the appropriate tool is expedited by being searchable, filterable and rankable. The ranking feature is vital to quickly identify and prioritize the more useful from the obscure tools. Tools are ranked via different criteria including the PageRank algorithm, date of publication, number of citations, average of votes and number of publications. miRToolsGallery provides links and data for the comprehensive collection of currently available miRNA tools with a ranking function which can be adjusted using different criteria according to specific requirements.fi
dc.format.mimetypeapplication/pdf
dc.language.isoeng
dc.publisherOxford University Press
dc.relation.ispartofseriesDatabase : The journal of Biological Databases and Curation
dc.rightsCC BY 4.0
dc.subject.othermiRToolsGallery
dc.titlemiRToolsGallery : a tag-based and rankable microRNA bioinformatics resources database portal
dc.typearticle
dc.identifier.urnURN:NBN:fi:jyu-201806043003
dc.contributor.laitosBio- ja ympäristötieteiden laitosfi
dc.contributor.laitosDepartment of Biological and Environmental Scienceen
dc.contributor.oppiaineEkologia ja evoluutiobiologiafi
dc.contributor.oppiaineEcology and Evolutionary Biologyen
dc.type.urihttp://purl.org/eprint/type/JournalArticle
dc.date.updated2018-06-04T12:15:21Z
dc.type.coarhttp://purl.org/coar/resource_type/c_2df8fbb1
dc.description.reviewstatuspeerReviewed
dc.relation.issn1758-0463
dc.relation.numberinseries0
dc.relation.volume2018
dc.type.versionpublishedVersion
dc.rights.copyright© The Authors 2018. Published by Oxford University Press
dc.rights.accesslevelopenAccessfi
dc.subject.ysobioinformatiikka
dc.subject.ysotyövälineet
dc.format.contentfulltext
jyx.subject.urihttp://www.yso.fi/onto/yso/p15748
jyx.subject.urihttp://www.yso.fi/onto/yso/p3761
dc.rights.urlhttps://creativecommons.org/licenses/by/4.0/
dc.relation.doi10.1093/database/bay004
dc.type.okmA1


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