University of Jyväskylä | JYX Digital Repository

  • English  | Give feedback |
    • suomi
    • English
 
  • Login
JavaScript is disabled for your browser. Some features of this site may not work without it.
View Item 
  • JYX
  • Artikkelit
  • Informaatioteknologian tiedekunta
  • View Item
JYX > Artikkelit > Informaatioteknologian tiedekunta > View Item

Model order effects on ICA of resting-state complex-valued fMRI data : application to schizophrenia

ThumbnailFinal Draft
View/Open
3.0 Mb

Downloads:  
Show download detailsHide download details  
Kuang, L.-D., Lin, Q.-H., Gong, X.-F., Cong, F., Sui, J., & Calhoun, V. D. (2018). Model order effects on ICA of resting-state complex-valued fMRI data : application to schizophrenia. Journal of Neuroscience Methods, 304, 24-38. https://doi.org/10.1016/j.jneumeth.2018.02.013
Published in
Journal of Neuroscience Methods
Authors
Kuang, Li-Dan |
Lin, Qiu-Hua |
Gong, Xiao-Feng |
Cong, Fengyu |
Sui, Jing |
Calhoun, Vince D.
Date
2018
Discipline
TietotekniikkaMathematical Information Technology
Copyright
© 2018 Elsevier B.V. This is a final draft version of an article whose final and definitive form has been published by Elsevier B.V. Published in this repository with the kind permission of the publisher.

 
Background Component splitting at higher model orders is a widely accepted finding for independent component analysis (ICA) of functional magnetic resonance imaging (fMRI) data. However, our recent study found that intact components occurred with subcomponents at higher model orders. New method This study investigated model order effects on ICA of resting-state complex-valued fMRI data from 82 subjects, which included 40 healthy controls (HCs) and 42 schizophrenia patients. In addition, we explored underlying causes for distinct component splitting between complex-valued data and magnitude-only data by examining model order effects on ICA of phase fMRI data. A best run selection method was proposed to combine subject averaging and a one-sample t-test. We selected the default mode network (DMN)-, visual-, and sensorimotor-related components from the best run of ICA at varying model orders from 10 to 140. Results Results show that component integration occurred in complex-valued and phase analyses, whereas component splitting emerged in magnitude-only analysis with increasing model order. Incorporation of phase data appears to play a complementary role in preserving integrity of brain networks. Comparison with existing method(s) When compared with magnitude-only analysis, the intact DMN component obtained in complex-valued analysis at higher model orders exhibited highly significant subject-level differences between HCs and patients with schizophrenia. We detected significantly higher activity and variation in anterior areas for HCs and in posterior areas for patients with schizophrenia. Conclusions These results demonstrate the potential of complex-valued fMRI data to contribute generally and specifically to brain network analysis in identification of schizophrenia-related changes. ...
Publisher
Elsevier BV
ISSN Search the Publication Forum
0165-0270
Keywords
independent component analysis (ICA) complex-valued fMRI data model order component splitting phase data signaalianalyysi skitsofrenia toiminnallinen magneettikuvaus
DOI
https://doi.org/10.1016/j.jneumeth.2018.02.013
URI

http://urn.fi/URN:NBN:fi:jyu-201804242345

Publication in research information system

https://converis.jyu.fi/converis/portal/detail/Publication/28004747

Metadata
Show full item record
Collections
  • Informaatioteknologian tiedekunta [1859]

Related items

Showing items with similar title or keywords.

  • Spatial source phase : A new feature for identifying spatial differences based on complex-valued resting-state fMRI data 

    Qiu, Yue; Lin, Qiu-Hua; Kuang, Li-Dan; Gong, Xiao-Feng; Cong, Fengyu; Wang, Yu-Ping; Calhoun, Vince D. (John Wiley & Sons, Inc., 2019)
    Spatial source phase, the phase information of spatial maps extracted from functional magnetic resonance imaging (fMRI) data by data‐driven methods such as independent component analysis (ICA), has rarely been studied. ...
  • Tensor clustering on outer-product of coefficient and component matrices of independent component analysis for reliable functional magnetic resonance imaging data decomposition 

    Hu, Guoqiang; Zhang, Qing; Waters, Abigail B.; Li, Huanjie; Zhang, Chi; Wu, Jianlin; Cong, Fengyu; Nickerson, Lisa D. (Elsevier BV, 2019)
    Background. Stability of spatial components is frequently used as a post-hoc selection criteria for choosing the dimensionality of an independent component analysis (ICA) of functional magnetic resonance imaging (fMRI) ...
  • Snowball ICA : A Model Order Free Independent Component Analysis Strategy for Functional Magnetic Resonance Imaging Data 

    Hu, Guoqiang; Waters, Abigail B.; Aslan, Serdar; Frederick, Blaise; Cong, Fengyu; Nickerson, Lisa D. (Frontiers Media, 2020)
    In independent component analysis (ICA), the selection of model order (i.e., number of components to be extracted) has crucial effects on functional magnetic resonance imaging (fMRI) brain network analysis. Model order ...
  • Shift-Invariant Canonical Polyadic Decomposition of Complex-Valued Multi-Subject fMRI Data with a Phase Sparsity Constraint 

    Kuang, Li-Dan; Lin, Qiu-Hua; Gong, Xiao-Feng; Cong, Fengyu; Wang, Yu-Ping; Calhoun, Vince D. (IEEE, 2020)
    Canonical polyadic decomposition (CPD) of multi-subject complex-valued fMRI data can be used to provide spatially and temporally shared components among groups with both magnitude and phase information. However, the CPD ...
  • Consistency of Independent Component Analysis for FMRI 

    Zhao, Wei; Li, Huanjie; Hu, Guoqiang; Hao, Yuxing; Zhang, Qing; Wu, Jianlin; Frederick, Blaise B.; Cong, Fengyu (Elsevier BV, 2021)
    Background Independent component analysis (ICA) has been widely used for blind source separation in the field of medical imaging. However, despite of previous substantial efforts, the stability of ICA components remains ...
  • Browse materials
  • Browse materials
  • Articles
  • Conferences and seminars
  • Electronic books
  • Historical maps
  • Journals
  • Tunes and musical notes
  • Photographs
  • Presentations and posters
  • Publication series
  • Research reports
  • Research data
  • Study materials
  • Theses

Browse

All of JYXCollection listBy Issue DateAuthorsSubjectsPublished inDepartmentDiscipline

My Account

Login

Statistics

View Usage Statistics
  • How to publish in JYX?
  • Self-archiving
  • Publish Your Thesis Online
  • Publishing Your Dissertation
  • Publication services

Open Science at the JYU
 
Data Protection Description

Accessibility Statement

Unless otherwise specified, publicly available JYX metadata (excluding abstracts) may be freely reused under the CC0 waiver.
Open Science Centre